# omoaigbe/3d_colon_ct_pipeline architecture

> Architecture diagram of the GitHub repository omoaigbe/3d_colon_ct_pipeline, generated by GitDiagram from its file tree, README and a sample of source files (last updated 2026-09-28). It is an AI-made overview: check details against the source.

- Interactive diagram: https://gitdiagram.com/omoaigbe/3d_colon_ct_pipeline
- Repository: https://github.com/omoaigbe/3d_colon_ct_pipeline

## Overview

This repository currently contains a minimal command-line script, not an evidenced CT-processing pipeline. It accepts an optional `--my_arg` value (default `0`) and logs the parsed arguments. The README is empty, so no additional product capabilities or processing stages can be established from the available evidence.

Main entry points: [`3D_colon_ct_pipeline/src/main.py`](https://github.com/omoaigbe/3d_colon_ct_pipeline/blob/main/3D_colon_ct_pipeline/src/main.py) (Argument logger)

## Diagram (Mermaid)

```mermaid
flowchart TD

node_user(("CLI user"))
node_main["Argument logger<br/>[main.py]"]
node_logs["Log output"]

node_user -->|"provides arguments"| node_main
node_main -->|"logs parameters"| node_logs

click node_main "https://github.com/omoaigbe/3d_colon_ct_pipeline/blob/main/3D_colon_ct_pipeline/src/main.py"

classDef toneNeutral fill:#f8fafc,stroke:#334155,stroke-width:1.5px,color:#0f172a
classDef toneBlue fill:#dbeafe,stroke:#2563eb,stroke-width:1.5px,color:#172554
classDef toneAmber fill:#fef3c7,stroke:#d97706,stroke-width:1.5px,color:#78350f
classDef toneMint fill:#dcfce7,stroke:#16a34a,stroke-width:1.5px,color:#14532d
classDef toneRose fill:#ffe4e6,stroke:#e11d48,stroke-width:1.5px,color:#881337
classDef toneIndigo fill:#e0e7ff,stroke:#4f46e5,stroke-width:1.5px,color:#312e81
classDef toneTeal fill:#ccfbf1,stroke:#0f766e,stroke-width:1.5px,color:#134e4a
class node_user toneBlue
class node_main toneTeal
class node_logs toneIndigo
```

## Components

### Other components

- **CLI user**
- [Argument logger](https://github.com/omoaigbe/3d_colon_ct_pipeline/blob/main/3D_colon_ct_pipeline/src/main.py): `3D_colon_ct_pipeline/src/main.py`
- **Log output**

## Connections

- CLI user → Argument logger: provides arguments
- Argument logger → Log output: logs parameters