How inbo/bird-tracking works
This repository is a collection of R-based workflows for publishing bird-tracking data to Movebank, Zenodo, GBIF and OBIS. Its user-facing purpose is to take GPS-tracking and colour-ringing datasets through conversion or preparation workflows and publish them; the tree also shows outlier processing and shared download/reference-data helpers. The README excerpt documents the overall publishing capability, but no source excerpts were provided, so links between individual scripts, helpers, datasets and destinations cannot be verified. Edges below reflect only the README’s general publication statement.
Main entry points: src Publication workflows
Components 17
Data workflows
- Publication workflows
src - Movebank conversion
src/movebank_to_frictionless.Rmd - Spreadsheet conversion
src/spreadsheet_to_movebank.Rmd - UvA-BiTS conversion
src/uvabits_to_movebank.Rmd - CRBirding to GBIF
src/crbirding_to_gbif.Rmd - Zenodo to GBIF
src/zenodo_to_gbif.Rmd - Gulliver workflow
src/gulliver.Rmd - Outlier workflow
src/outliers.Rmd
Shared helpers
- Data download
src/functions/download_data.R - Reference data
src/functions/get_reference_data.R - Mark outliers
src/functions/mark_outliers.R
Processed datasets
- Processed datasets
data/processed
Other components
- Data publisher
- Movebank
- Zenodo
- GBIF
- OBIS
Connections 5
- Data publisher → Publication workflows: runs
README.md - Publication workflows → Movebank: publishes data
README.md - Publication workflows → Zenodo: publishes data
README.md - Publication workflows → GBIF: publishes data
README.md - Publication workflows → OBIS: publishes data
README.md